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bulkdgd 2.0.0 documentation

  • Getting started
  • Installing bulkdgd
  • API reference
  • Command-line interface
  • Tutorials
  • Getting started
  • Installing bulkdgd
  • API reference
  • Command-line interface
  • Tutorials

Section Navigation

  • analysis - analyze data produced by the bulkdgd model
    • analysis.dea
    • analysis.reduction
    • analysis.residuals
  • core - the bulkdgd model
    • core.dataclasses
    • core.decoders
    • core.latents
    • core.metrics
    • core.outputmodules
    • core.priors
    • core.model
  • genes - creating customized lists of genes
  • ioutil - utilities for I/O operations
  • plotting - plotting utilities
  • recount3 - interacting with Recount3
  • Configuration for creating an instance of the BulkDGD model
  • Configuration for the optimization scheme
  • Configuration for training the bulkdgd model
  • API reference
  • core - the bulkdgd model

core - the bulkdgd model#

  • core.dataclasses
  • core.decoders
  • core.latents
  • core.metrics
  • core.outputmodules
  • core.priors
  • core.model

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analysis.residuals

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core.dataclasses
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