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bulkdgd 2.0.0 documentation
Getting started
Installing bulkdgd
API reference
Command-line interface
Tutorials
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Getting started
Installing bulkdgd
API reference
Command-line interface
Tutorials
System Settings
Light
Dark
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Section Navigation
analysis
- analyze data produced by the bulkdgd model
analysis.dea
analysis.reduction
analysis.residuals
core
- the bulkdgd model
core.dataclasses
core.decoders
core.latents
core.metrics
core.outputmodules
core.priors
core.model
genes
- creating customized lists of genes
ioutil
- utilities for I/O operations
plotting
- plotting utilities
recount3
- interacting with Recount3
Configuration for creating an instance of the BulkDGD model
Configuration for the optimization scheme
Configuration for training the bulkdgd model
API reference
recount3
- interacting with Recount3
recount3
- interacting with Recount3
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